Bio::Restriction EnzymeI
SummaryIncluded librariesPackage variablesSynopsisDescriptionGeneral documentationMethods
Summary
Bio::Restriction::EnzymeI - Interface class for restriction endonuclease
Package variables
No package variables defined.
Inherit
Bio::Root::RootI
Synopsis
  # do not run this class directly
Description
This module defines methods for a single restriction endonuclease.
Methods
name
No description
Code
site
No description
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cuts_after
No description
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cut
No description
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complementary_cut
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type
No description
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seq
No description
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string
No description
Code
revcom
No description
Code
recognition_length
No description
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non_ambiguous_length
No description
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cutter
No description
Code
palindromic
No description
Code
overhang
No description
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overhang_seq
No description
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is_ambiguous
No description
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is_prototype
No description
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prototype_name
No description
Code
isoschizomers
No description
Code
purge_isoschizomers
No description
Code
methylation_sites
No description
Code
purge_methylation_sites
No description
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microbe
No description
Code
source
No description
Code
vendors
No description
Code
purge_vendors
No description
Code
vendor
No description
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references
No description
Code
purge_references
No description
Code
xxxxxxx
No description
Code
Methods description
None available.
Methods code
namedescriptionprevnextTop
sub name {
  shift->throw_not_implemented;
}
sitedescriptionprevnextTop
sub site {
  shift->throw_not_implemented;
}
cuts_afterdescriptionprevnextTop
sub cuts_after {
  shift->throw_not_implemented;
}
cutdescriptionprevnextTop
sub cut {
  shift->throw_not_implemented;
}
complementary_cutdescriptionprevnextTop
sub complementary_cut {
  shift->throw_not_implemented;
}
typedescriptionprevnextTop
sub type {
  shift->throw_not_implemented;
}
seqdescriptionprevnextTop
sub seq {
  shift->throw_not_implemented;
}
stringdescriptionprevnextTop
sub string {
  shift->throw_not_implemented;
}
revcomdescriptionprevnextTop
sub revcom {
  shift->throw_not_implemented;
}
recognition_lengthdescriptionprevnextTop
sub recognition_length {
  shift->throw_not_implemented;
}
non_ambiguous_lengthdescriptionprevnextTop
sub non_ambiguous_length {
  shift->throw_not_implemented;
}
cutterdescriptionprevnextTop
sub cutter {
  shift->throw_not_implemented;
}
palindromicdescriptionprevnextTop
sub palindromic {
  shift->throw_not_implemented;
}
overhangdescriptionprevnextTop
sub overhang {
  shift->throw_not_implemented;
}
overhang_seqdescriptionprevnextTop
sub overhang_seq {
  shift->throw_not_implemented;
}
is_ambiguousdescriptionprevnextTop
sub is_ambiguous {
  shift->throw_not_implemented;
}
is_prototypedescriptionprevnextTop
sub is_prototype {
  shift->throw_not_implemented;
}
prototype_namedescriptionprevnextTop
sub prototype_name {
  shift->throw_not_implemented;
}
isoschizomersdescriptionprevnextTop
sub isoschizomers {
  shift->throw_not_implemented;
}
purge_isoschizomersdescriptionprevnextTop
sub purge_isoschizomers {
  shift->throw_not_implemented;
}
methylation_sitesdescriptionprevnextTop
sub methylation_sites {
  shift->throw_not_implemented;
}
purge_methylation_sitesdescriptionprevnextTop
sub purge_methylation_sites {
  shift->throw_not_implemented;
}
microbedescriptionprevnextTop
sub microbe {
  shift->throw_not_implemented;
}
sourcedescriptionprevnextTop
sub source {
  shift->throw_not_implemented;
}
vendorsdescriptionprevnextTop
sub vendors {
  shift->throw_not_implemented;
}
purge_vendorsdescriptionprevnextTop
sub purge_vendors {
  shift->throw_not_implemented;
}
vendordescriptionprevnextTop
sub vendor {
  shift->throw_not_implemented;
}
referencesdescriptionprevnextTop
sub references {
  shift->throw_not_implemented;
}
purge_referencesdescriptionprevnextTop
sub purge_references {
  shift->throw_not_implemented;
}
xxxxxxxdescriptionprevnextTop
sub xxxxxxx {
  shift->throw_not_implemented;
}
General documentation
FEEDBACKTop
Mailing ListsTop
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to one
of the Bioperl mailing lists. Your participation is much appreciated.
  bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting BugsTop
Report bugs to the Bioperl bug tracking system to help us keep track
the bugs and their resolution. Bug reports can be submitted via the
web:
  http://bugzilla.open-bio.org/
AUTHORTop
Heikki Lehvaslaiho, heikki-at-bioperl-dot-org
CONTRIBUTORSTop
Rob Edwards, redwards@utmem.edu
SEE ALSOTop
Bio::Restriction::Enzyme
APPENDIXTop
Methods beginning with a leading underscore are considered private and
are intended for internal use by this module. They are not considered
part of the public interface and are described here for documentation
purposes only.