| GenericParameters | An object for the parameters used to run programs |
| ParametersI | A Base object for the parameters used to run programs |
| RemoteBlast | Object for remote execution of the NCBI Blast
via HTTP |
| StandAloneBlast | Object for the local execution
of the NCBI BLAST program suite (blastall, blastpgp, bl2seq).
There is experimental support for WU-Blast and NCBI rpsblast. |
| StandAloneNCBIBlast | Object for the local execution
of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). With
experimental support for NCBI rpsblast. |
| StandAloneWUBlast | Object for the local execution
of WU-Blast. |
| WrapperBase | A Base object for wrappers around executables |