TOC for BioPerl-1.6.1::Bio::TreeIO
TreeEventBuilderBuild Bio::Tree::Tree's and Bio::Tree::Node's from Events
clusterA TreeIO driver module for parsing Algorithm::Cluster::treecluster() output
lintreeParser for lintree output trees
newickTreeIO implementation for parsing Newick/New Hampshire/PHYLIP format.
nexusA TreeIO driver module for parsing Nexus tree output from PAUP
nhxTreeIO implementation for parsing Newick/New Hampshire eXtendend (NHX) format.
pagBio::TreeIO driver for Pagel format
phyloxmlTreeIO implementation for parsing PhyloXML format.
svggraphA simple output format that converts a Tree object to an SVG output
tabtreeA simple output format which displays a tree as an ASCII drawing