Bio::DB DBAdaptorI
SummaryIncluded librariesPackage variablesSynopsisDescriptionGeneral documentationMethods
Toolbar
WebCvs
Summary
Bio::DB::DBAdaptorI - DESCRIPTION of Interface
Package variables
No package variables defined.
Included modules
Bio::Root::RootI
Carp
Inherit
Bio::Root::RootI
Synopsis
Give standard usage here
Description
This interface describes the basic datastore adaptor that acts as a factory.
It allows one to obtain adaptors for specific classes or objects, as well as
objects that make a class or object peristent.
Methods
get_object_adaptorDescriptionCode
create_persistentDescriptionCode
Methods description
get_object_adaptorcode    nextTop
 Title   : get_object_adaptor
Usage : $objadp = $adaptor->get_object_adaptor("Bio::SeqI");
Function: Obtain an PersistenceAdaptorI compliant object for the given class
or object.
Example :
Returns : The appropriate object adaptor, a Bio::DB::PersistenceAdaptorI
implementing object.
Args : The class (a string) or object for which the adaptor is to be
obtained. Optionally, a DBContextI implementing object to initialize
the adaptor with.
create_persistentcodeprevnextTop
 Title   : create_persistent
Usage : $dbadaptor->create_persistent($obj)
Function: Creates a PersistentObjectI implementing object that adapts the
given object to the datastore.
Example :
Returns : A Bio::DB::PeristentObjectI implementing object
Args : An object of a type that can be stored in the datastore adapted
by this factory. Alternatively, the class name of such an object.
All remaining arguments should be passed to the constructor of the
class if the first argument is a class name.
Methods code
get_object_adaptordescriptionprevnextTop
sub get_object_adaptor {
   my ($self,@args) = @_;

   $self->throw_not_implemented();
}
create_persistentdescriptionprevnextTop
sub create_persistent {
   my ($self,@args) = @_;

   $self->throw_not_implemented();
}


1;
}
General documentation
FEEDBACKTop
Mailing ListsTop
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to
the Bioperl mailing list. Your participation is much appreciated.
  bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support Top
 
Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and
reponsive experts will be able look at the problem and quickly
address it. Please include a thorough description of the problem
with code and data examples if at all possible.
Reporting BugsTop
Report bugs to the Bioperl bug tracking system to help us keep track
of the bugs and their resolution. Bug reports can be submitted via
the web:
  http://bugzilla.open-bio.org/
AUTHOR - Hilmar LappTop
Email hlapp at gmx.net
Describe contact details here
CONTRIBUTORSTop
Additional contributors names and emails here
APPENDIXTop
The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a _