Bio::Ontology::RelationshipFactory - Instantiates a new
Bio::Ontology::RelationshipI (or derived class) through a factory
No package variables defined.
# the default type is Bio::Ontology::Relationship
my $factory = Bio::Ontology::RelationshipFactory->new(
-type => 'Bio::Ontology::GOterm');
my $clu = $factory->create_object(-name => 'peroxisome',
-ontology => 'Gene Ontology',
-identifier => 'GO:0005777');
Title : newSee Bio::Ontology::Relationship, Bio::Ontology::RelationshipI.
Usage : my $obj = Bio::Ontology::RelationshipFactory->new();
Function: Builds a new Bio::Ontology::RelationshipFactory object
Returns : Bio::Ontology::RelationshipFactory
Args : -type => string, name of a Bio::Ontology::RelationshipI
The default is Bio::Ontology::Relationship.
my($class,@args) = @_;
my $self = $class->SUPER::new(@args);
$self->type($self->type() || "Bio::Ontology::Relationship");
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to
the Bioperl mailing list. Your participation is much appreciated.
email@example.com - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Please direct usage questions or support issues to the mailing list:
rather than to the module maintainer directly. Many experienced and
reponsive experts will be able look at the problem and quickly
address it. Please include a thorough description of the problem
with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track
of the bugs and their resolution. Bug reports can be submitted via
Email hlapp at gmx.net
The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a _