Bio::Network::IO::psi intact
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Summary
Bio::Network::IO::psi::intact - module to handle variations
in PSI MI format from the IntAct database
Package variables
No package variables defined.
Included modules
Bio::Annotation::Collection
Bio::Annotation::DBLink
Bio::Network::IO
Synopsis
Do not use this module directly, use Bio::Network::IO. For example:
  my $io = Bio::Network::IO->new(-format => 'psi',
-source => 'intact',
-file => 'data.xml');
my $network = $io->next_network;
Description
There are slight differences between PSI MI files offered by various public
databases. The Bio::Network::IO::psi* modules have methods for handling
these variations. To load a module like this use the optional "-source"
argument when creating a new Bio::Network::IO object.
Methods description
None available.
Methods code
No methods available.
General documentation
FEEDBACKTop
Mailing ListsTop
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to one
of the Bioperl mailing lists. Your participation is much appreciated.
  bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support Top
 
Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and
reponsive experts will be able look at the problem and quickly
address it. Please include a thorough description of the problem
with code and data examples if at all possible.
Reporting BugsTop
Report bugs to the Bioperl bug tracking system to help us keep track
the bugs and their resolution. Bug reports can be submitted via the
web:
  http://bugzilla.open-bio.org/
AUTHORSTop
Brian Osborne bosborne at alum.mit.edu
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